Merge pull request #3 from iPsychonaut/HS_Round_2

Corrected conda init medaka to conda init bash

Upated minibar.py to minibar_og.py for targeted searching

Update run_medaka.sh

Removed:

# Set the memory allocation for samtools sort (e.g., 4G per thread)
export SAMTOOLS_SORT_MEMORY=4G

Signed-off-by: Ian M. B. <99409346+iPsychonaut@users.noreply.github.com>

Uploaded for Sanity Check

Uploaded for Sanity Check.

Signed-off-by: Ian M. B. <99409346+iPsychonaut@users.noreply.github.com>

Update README.md

Updated to include chopper and mention allowed use of .fastq files as well.

Signed-off-by: Ian M. B. <99409346+iPsychonaut@users.noreply.github.com>

Update README.md

Updated to reflect GUI and current implementation.

Signed-off-by: Ian M. B. <99409346+iPsychonaut@users.noreply.github.com>

Added Error Checking & Python Import Calls to fundis_summarize.py

Added Error Checking updated function to accept Python import calls as well.

Signed-off-by: Ian M. B. <99409346+iPsychonaut@users.noreply.github.com>

Update README.md

Edited formating

Signed-off-by: Ian M. B. <99409346+iPsychonaut@users.noreply.github.com>

Initial commit