Skip to content

Commit

Permalink
solving merging conflics
Browse files Browse the repository at this point in the history
  • Loading branch information
ahoyosid committed Mar 2, 2017
2 parents 72e7dff + ebfcfc0 commit b3f0791
Show file tree
Hide file tree
Showing 2 changed files with 6 additions and 38 deletions.
38 changes: 0 additions & 38 deletions nilearn/decoding/space_net.py
Original file line number Diff line number Diff line change
Expand Up @@ -716,31 +716,7 @@ def fit(self, X, y):
tic = time.time()

# nifti masking
<<<<<<< HEAD
<<<<<<< HEAD
<<<<<<< HEAD
self.masker_ = check_embedded_nifti_masker(self, multi_subject=False)
=======
self.masker_ = check_masker(mask=self.mask,
target_affine=self.target_affine,
target_shape=self.target_shape,
standardize=self.standardize,
low_pass=self.low_pass,
high_pass=self.high_pass,
mask_strategy='epi', t_r=self.t_r,
memory=self.memory_)
>>>>>>> addressing checking masker comments
=======
# self.mask_args = {'mask_strategy' : 'epi', 'memory': self.memory_}
# self.mask_strategy = 'epi'
# memory = self.memory
# self.memory = self.memory_
self.masker_ = check_embedded_nifti_masker(self, multi_subject=False)
import pdb; pdb.set_trace() # XXX BREAKPOINT
>>>>>>> minor
=======
self.masker_ = check_embedded_nifti_masker(self, multi_subject=False)
>>>>>>> solving merging conflicts
X = self.masker_.fit_transform(X)

X, y = check_X_y(X, y, ['csr', 'csc', 'coo'], dtype=np.float,
Expand Down Expand Up @@ -816,22 +792,8 @@ def fit(self, X, y):
w = np.zeros((n_problems, X.shape[1] + 1))
self.all_coef_ = np.ndarray((n_problems, n_folds, X.shape[1]))

<<<<<<< HEAD
<<<<<<< HEAD
self.screening_percentile_ = _adjust_screening_percentile(
self.screening_percentile, self.mask_img_, verbose=self.verbose)
=======
self.screening_percentile_ = adjust_screening_percentile(
=======
self.screening_percentile_ = _adjust_screening_percentile(
<<<<<<< HEAD
>>>>>>> cleaning decoder tests
self.screening_percentile, self.mask_img_,
verbose=self.verbose)
>>>>>>> solving merging conflicts
=======
self.screening_percentile, self.mask_img_, verbose=self.verbose)
>>>>>>> solving merging conflicts

# main loop: loop on classes and folds
solver_params = dict(tol=self.tol, max_iter=self.max_iter)
Expand Down
6 changes: 6 additions & 0 deletions nilearn/decoding/tests/test_space_net.py
Original file line number Diff line number Diff line change
Expand Up @@ -111,19 +111,25 @@ def test_params_correctly_propagated_in_constructors():
def test_screening_space_net():
<<<<<<< HEAD
<<<<<<< HEAD
<<<<<<< HEAD
=======
>>>>>>> increasing coverage
=======
>>>>>>> ebfcfc0d8b4fc48a016c86aedaed3ed9a3933950
for verbose in [0, 2]:
screening_percentile = assert_warns(UserWarning,
_adjust_screening_percentile, 10,
mask, verbose)
<<<<<<< HEAD
<<<<<<< HEAD
=======
screening_percentile = assert_warns(UserWarning,
_adjust_screening_percentile, 10, mask)
>>>>>>> addressing checking masker comments
=======
>>>>>>> increasing coverage
=======
>>>>>>> ebfcfc0d8b4fc48a016c86aedaed3ed9a3933950
# We gave here a very small mask, judging by standards of brain size
# thus the screening_percentile_ corrected for brain size should
# be 100%
Expand Down

0 comments on commit b3f0791

Please sign in to comment.