Update command index

lamyj · Feb 21, 2023 · 9852c04 · 9852c04
1 parent 4c3495f
commit 9852c04
Showing 1 changed file with 3 additions and 1 deletion.
diff --git a/docs/commands/index.rst b/docs/commands/index.rst
@@ -6,8 +6,10 @@ Commands
 Dicomifier has a single command line executable, called ``dicomifier``, which accepts :ref:`several commands <commands>`:
 
 - List convertible data in a directory: ``dicomifier list my_directory``
+- Search for DICOM data matching the supplied search terms: ``dicomifier search -m PatientName="Doe^*" dicom_directory``
 - Convert Bruker data to DICOM: ``dicomifier to-dicom bruker_directory dicom_directory``
-- Convert Bruker or DICOM data to NIfTI: ``dicomifier to-nifti bruker_or_dicom_directory nifti_directory``
+- Convert Bruker or DICOM data to NIfTI+JSON: ``dicomifier to-nifti bruker_or_dicom_directory nifti_directory``
+- Extract diffusion data from NIfTI+JSON: ``dicomifier diffusion-scheme meta_data_file mrtrix diffusion.scheme`` or ``dicomifier diffusion-scheme meta_data_file fsm diffusion.bvecs diffusion.bvals``
 
 To list all available commands, run ``dicomifier --help``; to get help about a specific command, run ``dicomifier some-command --help``.