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Commits on Dec 12, 2023

• r573: fixed reversed ds on reverse strand

  lh3

  committedDec 12, 2023
  2a717a9

Commits on Dec 9, 2023

• r572: fixed memory leak

  lh3

  committedDec 9, 2023
  54c74fc

Commits on Oct 29, 2022

• r557: fixed another assertion failure. Resolve #80

  lh3

  committedOct 29, 2022
  ab929bf

Commits on Oct 25, 2022

• r556: fixed another assertion failure

  lh3

  committedOct 25, 2022
  701523b

Commits on Oct 21, 2022

• r555: fixed an assertion failure

  lh3

  committedOct 21, 2022
  8286c8e

Commits on May 3, 2022

• tune1-r528: fixed a few compiler warnings

  lh3

  committedMay 3, 2022
  80bc152

Commits on Apr 24, 2022

• r518: terminate long-running gwfa

  lh3

  committedApr 24, 2022
  368c074

• sync with lh3/gfatools@2b5b235

  lh3

  committedApr 24, 2022
  a75f12e

Commits on Apr 23, 2022

• temporary __rdtsc() timing

  lh3

  committedApr 23, 2022
  7db9e3c

Commits on Apr 14, 2022

• r500: fixed contained lchain after resolve_overlap

  lh3

  committedApr 14, 2022
  31d1c45

Commits on Mar 24, 2022

• fixed deadlock in lv89 when len==0

  lh3

  committedMar 24, 2022
  2d9be81

Commits on Mar 22, 2022

• remove query overlap; fixed a bug

  lh3

  committedMar 22, 2022
  e2ff87b

• don't use gwfa to link for paired end

  lh3

  committedMar 22, 2022
  351618f

• a bit code cleanup

  lh3

  committedMar 22, 2022
  7182236

Commits on Mar 21, 2022

• backup; currently buggy

  lh3

  committedMar 21, 2022
  5feab4d

Commits on Mar 20, 2022

• code backup

  lh3

  committedMar 20, 2022
  2197e39

• graph generation working, but not ideal

  lh3

  committedMar 20, 2022
  2a4c8df

Commits on Mar 16, 2022

• occ-based end filter

  lh3

  committedMar 16, 2022
  58af28c

Commits on Mar 13, 2022

• another code refactoring

  lh3

  committedMar 13, 2022
  1e3b2d8

• code refactoring for further changes

  lh3

  committedMar 13, 2022
  6114a0e

Commits on Mar 12, 2022

• further code cleanup

  lh3

  committedMar 12, 2022
  513e209

• removed a useless variable

  lh3

  committedMar 12, 2022
  b49e881

• removed unused code

  lh3

  committedMar 12, 2022
  700b4b8

Commits on Mar 9, 2022

• added seeds filtering from minimap2; not used

  lh3

  committedMar 9, 2022
  b2d4571

Commits on Mar 8, 2022

• removed the sequence heuristic in shortest_k()

  lh3

  committedMar 8, 2022
  2804e8a

• commented out debugging code

  lh3

  committedMar 8, 2022
  39c2c9c

• fixed mem leak and bug; fall back to shortk

  lh3

  committedMar 8, 2022
  c7c280f

Commits on Mar 7, 2022

• code backup

  lh3

  committedMar 7, 2022
  373d57a

• code refactoring for gwfa bridging

  lh3

  committedMar 7, 2022
  105311b

• sync with lh3/gfatools@deaf7c8

  lh3

  committedMar 7, 2022
  85c9446

Commits on Feb 28, 2022

• backup

  lh3

  committedFeb 28, 2022
  3084065

Commits on Feb 21, 2022

• r437: replaced khash with khashl

  lh3

  committedFeb 21, 2022
  3168268

Commits on Dec 25, 2021

• r433: fixed a typo in chaining

  lh3

  committedDec 25, 2021
  16ceaa5

• r432: fixed a bug caused by the new changes

  lh3

  committedDec 25, 2021
  0c9086b

Commits on Oct 24, 2020

• r387: fixed a typo, though it should be very minor

  lh3

  committedOct 24, 2020
  b53b344

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