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Li Lab McGill

McGill Computational Biology and Machine Learning Group

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  1. mixehr mixehr Public

    C++ 16 1

  2. singlecell-deepfeature singlecell-deepfeature Public

    Single Cell Generative Adversarial Network (scGAN)

    Jupyter Notebook 13 5

  3. GAT-ETM GAT-ETM Public

    "Modeling electronic health record data using an end-to-end knowledge-graph-informed topic model" paper on Sci Rep (2022)

    Python 7

  4. covid19_media covid19_media Public

    Python 6 2

  5. heterogeneous_ehr heterogeneous_ehr Public

    Jupyter Notebook 6

  6. gtm-decon gtm-decon Public

    Python 6 3

Repositories

Showing 10 of 22 repositories
  • MixEHR_Seed_Tutorial Public

    This tutorial is provided for the UK Biobank Data Training Workshop, Tokyo, Japan

    li-lab-mcgill/MixEHR_Seed_Tutorial’s past year of commit activity
    Jupyter Notebook 3 0 0 0 Updated Apr 29, 2024
  • MixEHR-SurG Public

    Code for MixEHR-SurG: a joint proportional hazard and guided topic model for inferring mortality-associated topics from electronic health records

    li-lab-mcgill/MixEHR-SurG’s past year of commit activity
    Python 0 0 0 0 Updated Dec 9, 2023
  • TSFpaper Public Forked from ddz16/TSFpaper

    This repository contains a reading list of papers on Time Series Forecasting/Prediction (TSF) and Spatio-Temporal Forecasting/Prediction (STF). These papers are mainly categorized according to the type of model.

    li-lab-mcgill/TSFpaper’s past year of commit activity
    0 149 0 0 Updated Nov 22, 2023
  • hART-heart-failure-Attentive-Risk-Trajectory Public
    li-lab-mcgill/hART-heart-failure-Attentive-Risk-Trajectory’s past year of commit activity
    Jupyter Notebook 0 2 0 0 Updated Sep 1, 2023
  • gtm-decon Public
    li-lab-mcgill/gtm-decon’s past year of commit activity
    Python 6 GPL-3.0 3 2 0 Updated Aug 2, 2023
  • iGEM Public
    li-lab-mcgill/iGEM’s past year of commit activity
    Python 0 0 0 0 Updated Apr 27, 2023
  • getm Public
    li-lab-mcgill/getm’s past year of commit activity
    Jupyter Notebook 3 0 0 0 Updated Mar 29, 2023
  • GAT-ETM Public

    "Modeling electronic health record data using an end-to-end knowledge-graph-informed topic model" paper on Sci Rep (2022)

    li-lab-mcgill/GAT-ETM’s past year of commit activity
    Python 7 0 2 0 Updated Mar 16, 2023
  • MixEHR-Seed Public

    Public code for KDD 2022 paper Automatic Phenotyping by a Seed-guided Topic Model

    li-lab-mcgill/MixEHR-Seed’s past year of commit activity
    Python 3 1 0 0 Updated Jul 7, 2022
  • MixEHR-Guided Public
    li-lab-mcgill/MixEHR-Guided’s past year of commit activity
    C++ 1 0 0 0 Updated Jun 17, 2022
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