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Reformat tables of content with latest Markdown plugin
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@twpayne
twpayne committed Dec 19, 2019
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2 changes: 1 addition & 1 deletion docs/CHANGES.md
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<!--- toc --->
* [Upcoming](#upcoming)
* [`gpgRecipient` config variable changing to `gpg.recipient`](#gpgrecipient-config-variable-changing-to-gpgrecipient)
* [gpgRecipient config variable changing to gpg.recipient](#gpgrecipient-config-variable-changing-to-gpgrecipient)

## Upcoming

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6 changes: 3 additions & 3 deletions docs/FAQ.md
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<!--- toc --->
* [How can I quickly check for problems with chezmoi on my machine?](#how-can-i-quickly-check-for-problems-with-chezmoi-on-my-machine)
* [What are the consequences of "bare" modifications to the target files? If my `.zshrc` is managed by chezmoi and I edit `~/.zshrc` without using `chezmoi edit`, what happens?](#what-are-the-consequences-of-bare-modifications-to-the-target-files-if-my-zshrc-is-managed-by-chezmoi-and-i-edit-zshrc-without-using-chezmoi-edit-what-happens)
* [What are the consequences of &quot;bare&quot; modifications to the target files? If my .zshrc is managed by chezmoi and I edit ~/.zshrc without using chezmoi edit, what happens?](#what-are-the-consequences-of-quotbarequot-modifications-to-the-target-files-if-my-zshrc-is-managed-by-chezmoi-and-i-edit-zshrc-without-using-chezmoi-edit-what-happens)
* [How can I tell what dotfiles in my home directory aren't managed by chezmoi? Is there an easy way to have chezmoi manage a subset of them?](#how-can-i-tell-what-dotfiles-in-my-home-directory-arent-managed-by-chezmoi-is-there-an-easy-way-to-have-chezmoi-manage-a-subset-of-them)
* [If there's a mechanism in place for the above, is there also a way to tell chezmoi to ignore specific files or groups of files (e.g. by directory name or by glob)?](#if-theres-a-mechanism-in-place-for-the-above-is-there-also-a-way-to-tell-chezmoi-to-ignore-specific-files-or-groups-of-files-eg-by-directory-name-or-by-glob)
* [If the target already exists, but is "behind" the source, can chezmoi be configured to preserve the target version before replacing it with one derived from the source?](#if-the-target-already-exists-but-is-behind-the-source-can-chezmoi-be-configured-to-preserve-the-target-version-before-replacing-it-with-one-derived-from-the-source)
* [If the target already exists, but is &quot;behind&quot; the source, can chezmoi be configured to preserve the target version before replacing it with one derived from the source?](#if-the-target-already-exists-but-is-quotbehindquot-the-source-can-chezmoi-be-configured-to-preserve-the-target-version-before-replacing-it-with-one-derived-from-the-source)
* [How do I only run a script when a file has changed?](#how-do-i-only-run-a-script-when-a-file-has-changed)
* [I've made changes to both the destination state and the source state that I want to keep. How can I keep them both?](#ive-made-changes-to-both-the-destination-state-and-the-source-state-that-i-want-to-keep-how-can-i-keep-them-both)
* [chezmoi's source file naming system cannot handle all possible filenames](#chezmois-source-file-naming-system-cannot-handle-all-possible-filenames)
* [gpg encryption fails. What could be wrong?](#gpg-encryption-fails-what-could-be-wrong)
* [I'm getting errors trying to build chezmoi from source](#im-getting-errors-trying-to-build-chezmoi-from-source)
* [What inspired chezmoi?](#what-inspired-chezmoi)
* [Can I use chezmoi outside my home directory?](#can-i-use-chezmoi-outside-my-home-directory)
* [Where does the name "chezmoi" come from?](#where-does-the-name-chezmoi-come-from)
* [Where does the name &quot;chezmoi&quot; come from?](#where-does-the-name-quotchezmoiquot-come-from)
* [What other questions have been asked about chezmoi?](#what-other-questions-have-been-asked-about-chezmoi)
* [Where do I ask a question that isn't answered here?](#where-do-i-ask-a-question-that-isnt-answered-here)

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112 changes: 56 additions & 56 deletions docs/REFERENCE.md
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<!--- toc --->
* [Concepts](#concepts)
* [Global command line flags](#global-command-line-flags)
* [`--color` *value*](#--color-value)
* [`-c`, `--config` *filename*](#-c---config-filename)
* [`--debug`](#--debug)
* [`-D`, `--destination` *directory*](#-d---destination-directory)
* [`-f`, `--follow`](#-f---follow)
* [`-n`, `--dry-run`](#-n---dry-run)
* [`-h`, `--help`](#-h---help)
* [`-r`. `--remove`](#-r---remove)
* [`-S`, `--source` *directory*](#-s---source-directory)
* [`-v`, `--verbose`](#-v---verbose)
* [`--version`](#--version)
* [--color value](#--color-value)
* [-c, --config filename](#-c---config-filename)
* [--debug](#--debug)
* [-D, --destination directory](#-d---destination-directory)
* [-f, --follow](#-f---follow)
* [-n, --dry-run](#-n---dry-run)
* [-h, --help](#-h---help)
* [-r. --remove](#-r---remove)
* [-S, --source directory](#-s---source-directory)
* [-v, --verbose](#-v---verbose)
* [--version](#--version)
* [Configuration file](#configuration-file)
* [Configuration variables](#configuration-variables)
* [Source state attributes](#source-state-attributes)
* [Special files and directories](#special-files-and-directories)
* [`.chezmoi.<format>.tmpl`](#chezmoiformattmpl)
* [`.chezmoiignore`](#chezmoiignore)
* [`.chezmoiremove`](#chezmoiremove)
* [`.chezmoitemplates`](#chezmoitemplates)
* [`.chezmoiversion`](#chezmoiversion)
* [.chezmoi.&lt;format&gt;.tmpl](#chezmoiltformatgttmpl)
* [.chezmoiignore](#chezmoiignore)
* [.chezmoiremove](#chezmoiremove)
* [.chezmoitemplates](#chezmoitemplates)
* [.chezmoiversion](#chezmoiversion)
* [Commands](#commands)
* [`add` *targets*](#add-targets)
* [`apply` [*targets*]](#apply-targets)
* [`archive`](#archive)
* [`cat` targets](#cat-targets)
* [`cd`](#cd)
* [`chattr` *attributes* *targets*](#chattr-attributes-targets)
* [`completion` *shell*](#completion-shell)
* [`data`](#data)
* [`diff` [*targets*]](#diff-targets)
* [`docs` [*regexp*]](#docs-regexp)
* [`doctor`](#doctor)
* [`dump` [*targets*]](#dump-targets)
* [`edit` [*targets*]](#edit-targets)
* [`edit-config`](#edit-config)
* [`forget` *targets*](#forget-targets)
* [`help` *command*](#help-command)
* [`init` [*repo*]](#init-repo)
* [`import` *filename*](#import-filename)
* [`merge` *targets*](#merge-targets)
* [`remove` *targets*](#remove-targets)
* [`secret`](#secret)
* [`source` [*args*]](#source-args)
* [`source-path` [*targets*]](#source-path-targets)
* [`unmanaged`](#unmanaged)
* [`update`](#update)
* [`upgrade`](#upgrade)
* [`verify` [*targets*]](#verify-targets)
* [add targets](#add-targets)
* [apply [targets]](#apply-targets)
* [archive](#archive)
* [cat targets](#cat-targets)
* [cd](#cd)
* [chattr attributes targets](#chattr-attributes-targets)
* [completion shell](#completion-shell)
* [data](#data)
* [diff [targets]](#diff-targets)
* [docs [regexp]](#docs-regexp)
* [doctor](#doctor)
* [dump [targets]](#dump-targets)
* [edit [targets]](#edit-targets)
* [edit-config](#edit-config)
* [forget targets](#forget-targets)
* [help command](#help-command)
* [init [repo]](#init-repo)
* [import filename](#import-filename)
* [merge targets](#merge-targets)
* [remove targets](#remove-targets)
* [secret](#secret)
* [source [args]](#source-args)
* [source-path [targets]](#source-path-targets)
* [unmanaged](#unmanaged)
* [update](#update)
* [upgrade](#upgrade)
* [verify [targets]](#verify-targets)
* [Editor configuration](#editor-configuration)
* [Umask configuration](#umask-configuration)
* [Template variables](#template-variables)
* [Template functions](#template-functions)
* [`bitwarden` [*args*]](#bitwarden-args)
* [`gopass` *gopass-name*](#gopass-gopass-name)
* [`keepassxc` *entry*](#keepassxc-entry)
* [`keepassxcAttribute` *entry* *attribute*](#keepassxcattribute-entry-attribute)
* [`keyring` *service* *user*](#keyring-service-user)
* [`lastpass` *id*](#lastpass-id)
* [`onepassword` *uuid*](#onepassword-uuid)
* [`onepasswordDocument` *uuid*](#onepassworddocument-uuid)
* [`pass` *pass-name*](#pass-pass-name)
* [`promptString` *prompt*](#promptstring-prompt)
* [`secret` [*args*]](#secret-args)
* [`secretJSON` [*args*]](#secretjson-args)
* [`vault` *key*](#vault-key)
* [bitwarden [args]](#bitwarden-args)
* [gopass gopass-name](#gopass-gopass-name)
* [keepassxc entry](#keepassxc-entry)
* [keepassxcAttribute entry attribute](#keepassxcattribute-entry-attribute)
* [keyring service user](#keyring-service-user)
* [lastpass id](#lastpass-id)
* [onepassword uuid](#onepassword-uuid)
* [onepasswordDocument uuid](#onepassworddocument-uuid)
* [pass pass-name](#pass-pass-name)
* [promptString prompt](#promptstring-prompt)
* [secret [args]](#secret-args)
* [secretJSON [args]](#secretjson-args)
* [vault key](#vault-key)

## Concepts

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