The most up to date version of the q2-SCNIC repo is here!
A package for accessing the primary methods of SCNIC via QIIME2.
First, make sure you have SCNIC installed:
conda install -q scnic
OR
pip install scnic
Next to install the plugin:
pip install git+https://github.com/lozuponelab/q2-SCNIC.git
qiime dev refresh-cache
Finally to see what functions are available, you can use:
qiime SCNIC --help