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Python solution for the application of machine learning to Pop PK model selection.
A Python framework for high performance GPU simulation and graphics
Physiologically based pharmacokinetic (PBPK) model of talinolol.
Models and simulator for Interactive modeling site: https://sites.google.com/view/interactive-modeling/home
A coupling library for partitioned multi-physics simulations, including, but not restricted to fluid-structure interaction and conjugate heat transfer simulations.
Create parameter estimation problems for ODE models
The source code and issue tracker for the SBML.org website.
PyBioPAX: A python implementation of the BioPAX object model
Python package for working with PEtab files
A Python toolkit for pathology image analysis algorithms.
Program for the analysis and visualization of whole-slide images in digital pathology
Matplotlib style sheets to nicely format figures for scientific papers, thesis and presentations while keeping them fully editable in Adobe Illustrator.
Repository of models to test exchange of sbml-spatial models.
📛 A Python package for using ontologies, terminologies, and biomedical nomenclatures
A Database-based knowledge back-end built on and for INDRA. The INDRA Database is a service that can be set up by any user with their own content and knowledge access. Our implementation of the dat…
📮 An integrative registry of biological databases, ontologies, and nomenclatures.
INDRA (Integrated Network and Dynamical Reasoning Assembler) is an automated model assembly system interfacing with NLP systems and databases to collect knowledge, and through a process of assembly…
Retrieve and print Python package dependencies.