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server occasionally returns edges that aren't valid ints #29

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Phelimb opened this issue Jan 18, 2016 · 1 comment

Phelimb commented Jan 18, 2016

e.g.

ATGCGTTATATTCGCCTGTGT
{
"key": "ACACAGGCGAATATAACGCAT", "colours": [1],
"left": "AT", "right": "A",
"edges": "a3",
"links": []
}

I'm not sure if this is intended behaviour though?

Member

noporpoise commented Jan 20, 2016

Edge coding is explained here in the wiki:

https://github.com/mcveanlab/mccortex/wiki/McCortex-HTTP-Webserver#hexadecimal-edge-coding

It's a compact way to specify each samples' edges using only two characters per colour.

noporpoise closed this as completed

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