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add term dysplasia of the proximal femoral epiphyses (#7862)
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* add new term

* add provenance

* add source for is_a
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twhetzel committed Jun 28, 2024
1 parent 2581b47 commit 6804f18
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11 changes: 11 additions & 0 deletions src/ontology/mondo-edit.obo
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Expand Up @@ -160198,6 +160198,7 @@ xref: SCTID:270545000 {source="DOID:14415"}
xref: UMLS:C0023234 {source="MEDGEN:6035", source="MONDO:equivalentTo", source="MONDO:MEDGEN"}
is_a: MONDO:0018381 {source="DOID:14415", source="GARD:0006874", source="MONDO:Redundant", source="Orphanet:2380"} ! osteochondrosis
is_a: MONDO:0022800 {source="PMID:31633310"} ! type 2 collagenopathy
is_a: MONDO:1030002 {source="https://clinicalgenome.org/affiliation/40065/", source="https://orcid.org/0009-0003-2127-3550"} ! dysplasia of the proximal femoral epiphyses
relationship: disease_has_feature HP:0010885 ! Avascular necrosis
relationship: disease_has_feature MONDO:0005380 {source="DOID:14415/inferred", source="MESH:D007873/inferred", source="MONDO:Redundant", source="NCIT:C34766", source="Orphanet:2380/inferred"} ! osteonecrosis
relationship: excluded_from_qc_check http://purl.obolibrary.org/obo/mondo/sparql/qc/general/qc-single-child.sparql
Expand Down Expand Up @@ -257424,6 +257425,7 @@ xref: SCTID:254064009 {source="MONDO:equivalentTo"}
xref: UMLS:C0432214 {source="MEDGEN:609409", source="MONDO:equivalentTo", source="MONDO:MEDGEN"}
is_a: MONDO:0016761 {source="Orphanet:93279"} ! spondyloepiphyseal dysplasia
is_a: MONDO:0022800 {source="Orphanet:93279", source="PMID:31633310"} ! type 2 collagenopathy
is_a: MONDO:1030002 {source="https://clinicalgenome.org/affiliation/40065/", source="https://orcid.org/0009-0003-2127-3550"} ! dysplasia of the proximal femoral epiphyses
relationship: has_material_basis_in_germline_mutation_in http://identifiers.org/hgnc/2200 {source="MONDO:mim2gene_medgen"} ! COL2A1
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/4948" xsd:anyURI

Expand Down Expand Up @@ -526789,6 +526791,7 @@ xref: Orphanet:86820 {source="OMIM:608805"}
xref: UMLS:C4551562 {source="MONDO:equivalentTo", source="MONDO:MEDGEN", source="MEDGEN:1639295"}
is_a: MONDO:0012126 {source="OMIM:608805"} ! familial avascular necrosis of femoral head
is_a: MONDO:0022800 {source="PMID:31633310"} ! type 2 collagenopathy
is_a: MONDO:1030002 {source="https://clinicalgenome.org/affiliation/40065/", source="https://orcid.org/0009-0003-2127-3550"} ! dysplasia of the proximal femoral epiphyses
relationship: has_material_basis_in_germline_mutation_in http://identifiers.org/hgnc/2200 {source="MONDO:mim2gene_medgen"} ! COL2A1
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/4521" xsd:anyURI
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/4948" xsd:anyURI
Expand Down Expand Up @@ -573251,6 +573254,14 @@ relationship: has_characteristic MONDO:0021152 ! inherited
property_value: http://purl.org/dc/terms/creator "https://orcid.org/0000-0002-3458-4839" xsd:string
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/6897" xsd:anyURI

[Term]
id: MONDO:1030002
name: dysplasia of the proximal femoral epiphyses
def: "A developmental disorder affecting the growth and development of the proximal end of the femur (thigh bone) near the hip joint characterized by avascular necrosis of the femoral head, cystic changes of the femoral head, and/or sclerosis of the femoral head. It is a relatively milder form of the other skeletal disorders associated with COL2A1." [https://clinicalgenome.org/affiliation/40065/, https://orcid.org/0009-0003-2127-3550]
is_a: MONDO:0022800 {source="https://clinicalgenome.org/affiliation/40065/", source="https://orcid.org/0009-0003-2127-3550"} ! type 2 collagenopathy
property_value: http://purl.org/dc/terms/creator https://orcid.org/0000-0002-3458-4839
property_value: IAO:0000233 "https://github.com/monarch-initiative/mondo/issues/7379" xsd:anyURI

[Term]
id: MONDO:8000000
name: infectious discitis
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