Chromagnon

Image correction software for chromatic shifts in fluorescence microscopy.

Acceptable image file formats

Reading

• Most microscopy formats

Writing

• multipage-tiff (ome.tif)
• DeltaVision (.dv)

How it works

Read the domument

Downloads

The ready to use packages are available here

The source

The source codes are written in pure python and works on the following platforms and dependencies.

Platforms successfully tested:

• MacOSX64bit (10.9.5-10.12.5)
• Windows64bit (XP-10)
• Linux Ubuntu(16)

Dependencies:

• python (2.7)
• opencv
• numpy
• scipy
• wxpython (3.0)
• pyopengl
• fftw3 with FFTW3.3.4
• javabridge
• bioformats

Authored and maintained by Atsushi Matsuda.