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get rca-config from freesurfer dev (Deep-MI#159)
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testing was successful, so these upstream fixes can be included into dev now.
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m-reuter committed May 25, 2022
1 parent 81a1c07 commit d70a3c1
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4 changes: 3 additions & 1 deletion Docker/install_fs_pruned.sh
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Expand Up @@ -361,7 +361,9 @@ ln -s $p3 $fsd/bin/fspython

# modify rca_config to work with python3.8
# (it misunderstands -hemi as -h for help and emi)
sed -i 's/allow_abbrev=False/allow_abbrev=False,add_help=False/' $fsd/python/scripts/rca-config
# sed -i 's/allow_abbrev=False/allow_abbrev=False,add_help=False/' $fsd/python/scripts/rca-config
# this and problem with -s has been fixed in freesurfer dev, so we get it from there:
wget https://raw.githubusercontent.com/freesurfer/freesurfer/dev/scripts/rca-config -O $fsd/python/scripts/rca-config

#cleanup
rm -rf $fss
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