filter: Error on sequence duplicates #2794

Job	Run time
mypy	52s
pathogen-repo-ci (dengue)	2m 40s
check-docs	39s
pathogen-repo-ci (lassa)	50s
pathogen-repo-ci-v0 (avian-flu)	57s
pathogen-repo-ci (measles)	1m 14s
pyright	16s
pathogen-repo-ci-v0 (ebola)	53s
pathogen-repo-ci (mpox)	1m 18s
pathogen-repo-ci-v0 (mumps)	55s
pathogen-repo-ci (seasonal-cov)	1m 46s
test (python=3.8 biopython=1.80)	11m 6s
pathogen-repo-ci-v0 (ncov)	1m 35s
test (python=3.8 biopython=latest)	11m 30s
pathogen-repo-ci (zika)	56s
pathogen-repo-ci-v0 (rsv)	8m 38s
test (python=3.9 biopython=1.80)	11m 49s
pathogen-repo-ci-v0 (seasonal-flu)	1m 2s
test (python=3.9 biopython=latest)	11m 56s
pathogen-repo-ci-v0 (tb)	1m 14s
test (python=3.10 biopython=1.80)	11m 18s
test (python=3.10 biopython=latest)	11m 33s
test (python=3.11 biopython=1.80)	11m 57s
test (python=3.11 biopython=latest)	11m 33s
build-docs / build-conda	0s
build-docs / build-pip	2m 6s
codecov	18s
	2h 0m 51s

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