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Bump mamba-org/setup-micromamba from 1 to 2
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Bumps [mamba-org/setup-micromamba](https://github.com/mamba-org/setup-micromamba) from 1 to 2.
- [Release notes](https://github.com/mamba-org/setup-micromamba/releases)
- [Commits](mamba-org/setup-micromamba@v1...v2)

---
updated-dependencies:
- dependency-name: mamba-org/setup-micromamba
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
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dependabot[bot] authored Oct 7, 2024
1 parent 129fd7e commit 4486565
Showing 1 changed file with 3 additions and 3 deletions.
6 changes: 3 additions & 3 deletions .github/workflows/ci.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -67,7 +67,7 @@ jobs:
# available on PyPI allows us to test against dependencies installed by pip,
# which may have slightly different versions compared to Conda counterparts.
- name: Install dependencies from Conda
uses: mamba-org/setup-micromamba@v1
uses: mamba-org/setup-micromamba@v2
with:
create-args: mafft raxml fasttree iqtree vcftools sqlite tsv-utils biopython=${{ matrix.biopython-version }} python=${{ matrix.python-version }}
condarc: |
Expand Down Expand Up @@ -127,7 +127,7 @@ jobs:

# Set up a Conda environment that replicates Nextstrain's Conda runtime.
- name: Install nextstrain-base from Conda
uses: mamba-org/setup-micromamba@v1
uses: mamba-org/setup-micromamba@v2
with:
create-args: nextstrain-base
condarc: |
Expand Down Expand Up @@ -263,7 +263,7 @@ jobs:

# Set up a Conda environment that replicates Nextstrain's Conda runtime.
- name: Install nextstrain-base from Conda
uses: mamba-org/setup-micromamba@v1
uses: mamba-org/setup-micromamba@v2
with:
create-args: nextstrain-base
condarc: |
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