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feat: add jq and bump nextalign/clade to 2.4.0
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corneliusroemer authored Aug 3, 2022
1 parent 9f4e4b7 commit 8a6a29d
Showing 1 changed file with 3 additions and 2 deletions.
5 changes: 3 additions & 2 deletions Dockerfile
Original file line number Diff line number Diff line change
Expand Up @@ -138,6 +138,7 @@ RUN apt-get update && apt-get install -y --no-install-recommends \
ca-certificates \
curl \
gzip \
jq \
less \
nodejs \
perl \
Expand All @@ -164,12 +165,12 @@ COPY --from=builder /build/vcftools/built/bin/ /usr/local/bin/
COPY --from=builder /build/vcftools/built/share/ /usr/local/share/

# Add Nextalign v2
RUN curl -fsSL https://github.com/nextstrain/nextclade/releases/download/2.3.0/nextalign-x86_64-unknown-linux-gnu \
RUN curl -fsSL https://github.com/nextstrain/nextclade/releases/download/2.4.0/nextalign-x86_64-unknown-linux-gnu \
--output /usr/local/bin/nextalign2 \
&& chmod a+rx /usr/local/bin/nextalign2

# Add Nextclade v2
RUN curl -fsSL https://github.com/nextstrain/nextclade/releases/download/2.3.0/nextclade-x86_64-unknown-linux-gnu \
RUN curl -fsSL https://github.com/nextstrain/nextclade/releases/download/2.4.0/nextclade-x86_64-unknown-linux-gnu \
--output /usr/local/bin/nextclade2 \
&& chmod a+rx /usr/local/bin/nextclade2

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