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CWL Model, Encoding & Decoding #421

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CWL Model, Encoding & Decoding #421

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Commits on Oct 14, 2024

  1. Add cwl model

    @caroott
    caroott committed Oct 14, 2024
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  2. Add cwl decode functions

    @caroott
    caroott committed Oct 14, 2024
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  3. Add testing project

    @caroott
    caroott committed Oct 14, 2024
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  4. fix references in decode

    @caroott
    caroott committed Oct 14, 2024
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  5. fix cwl type naming

    @caroott
    caroott committed Oct 14, 2024
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  6. change naming of CWL to CWLProcessingUnits

    @caroott
    caroott committed Oct 14, 2024
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  7. fix test fsproj

    @caroott
    caroott committed Oct 14, 2024
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  8. add test strings

    @caroott
    caroott committed Oct 14, 2024
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  9. Add cwl test

    @caroott
    caroott committed Oct 14, 2024
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  10. fix optional fields

    @caroott
    caroott committed Oct 14, 2024
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  11. rewrite tests to be more clear

    @caroott
    caroott committed Oct 14, 2024
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  12. reorganize tests

    @caroott
    caroott committed Oct 14, 2024
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  13. dix dockerFile requirement

    @caroott
    caroott committed Oct 14, 2024
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  14. fix EnvVarRequirement

    @caroott
    caroott committed Oct 14, 2024
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  15. fix SchemaDefRequirement

    @caroott
    caroott committed Oct 14, 2024
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  16. fix SoftwareRequirements

    @caroott
    caroott committed Oct 14, 2024
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  17. fix workdirReq and resourceReq

    @caroott
    caroott committed Oct 14, 2024
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  18. start separating processunits for better modularity / edge case handling

    @caroott
    caroott committed Oct 14, 2024
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  19. reorder and specify wf specific types

    @caroott
    caroott committed Oct 14, 2024
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  20. change in-/outputs to dynamicObj for more flexibility

    @caroott
    caroott committed Oct 14, 2024
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  21. update yamlicious dependency to 0.0.2

    @caroott
    caroott committed Oct 14, 2024
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  22. add workflow steps

    @caroott
    caroott committed Oct 14, 2024
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  23. add workflow description type

    @caroott
    caroott committed Oct 14, 2024
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  24. add steps decoding

    @caroott
    caroott committed Oct 14, 2024
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  25. fix direct map decode

    @caroott
    caroott committed Oct 14, 2024
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  26. add WorkflowSteps tests

    @caroott
    caroott committed Oct 14, 2024
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  27. support direct type mappings for inputs and outputs

    @caroott
    caroott committed Oct 14, 2024
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  28. remove try with for dirent initial workdir

    @caroott
    caroott committed Oct 14, 2024
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  29. add overflow decoder

    @caroott
    caroott committed Oct 14, 2024
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  30. add cmd tool metadata and tests

    @caroott
    caroott committed Oct 14, 2024
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  31. fix for new dynamic obj version

    @caroott
    caroott committed Oct 14, 2024
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  32. update fsproj

    @caroott
    caroott committed Oct 14, 2024
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  33. Update YAMLicious to version 0.0.2

    @caroott
    caroott committed Oct 14, 2024
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  34. rename Type to Type_ for fable

    @caroott
    caroott committed Oct 14, 2024
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  35. add failcase to requirements

    @caroott
    caroott committed Oct 14, 2024
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  36. add wf requirements to decoder

    @caroott
    caroott committed Oct 14, 2024
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  37. add metadata and dynobj testing (fix test runs)

    @caroott
    caroott committed Oct 14, 2024
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  38. trim strings for python

    @caroott
    caroott committed Oct 14, 2024
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Commits on Oct 15, 2024

  1. update yamlicious version

    @caroott
    caroott committed Oct 15, 2024
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  2. add workflow decoding

    @caroott
    caroott committed Oct 15, 2024
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  3. Merge branch 'main' into CWL

    @caroott
    caroott authored Oct 15, 2024
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  4. add cwl to all test list

    @caroott
    caroott committed Oct 15, 2024
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Commits on Oct 17, 2024

  1. rename types and tests

    @caroott
    caroott committed Oct 17, 2024
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Commits on Oct 18, 2024

  1. add attachmembers attribute

    @caroott
    caroott committed Oct 18, 2024
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  2. switch to resizearray and add some comments

    @caroott
    caroott committed Oct 18, 2024
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  3. add optional field to inputs

    @caroott
    caroott committed Oct 18, 2024
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