Skip to content
@ohsu-comp-bio

Oregon Health and Science University Computational Biology

Pinned Loading

  1. funnel funnel Public

    Funnel is a toolkit for distributed task execution via a simple, standard API.

    Go 117 32

  2. tesseract tesseract Public

    Python lib for remote code execution via the GA4GH TES API

    Python 6

  3. g2p-aggregator g2p-aggregator Public

    Associations of genomic features, drugs and diseases

    HTML 48 11

Repositories

Showing 10 of 192 repositories
  • glasswing-status Public

    Uptime/downtime monitor and status page for CBDS

    ohsu-comp-bio/glasswing-status’s past year of commit activity
    Markdown 0 MIT 0 0 0 Updated Jun 30, 2024
  • funnel Public

    Funnel is a toolkit for distributed task execution via a simple, standard API.

    ohsu-comp-bio/funnel’s past year of commit activity
    Go 117 MIT 32 104 (1 issue needs help) 6 Updated Jun 28, 2024
  • vrs-annotator Public

    Annotates VCF Variants with VRS IDs

    ohsu-comp-bio/vrs-annotator’s past year of commit activity
    WDL 0 0 0 0 Updated Jun 27, 2024
  • sower Public Forked from uc-cdis/sower

    Job dispatcher for Kubernetes

    ohsu-comp-bio/sower’s past year of commit activity
    Go 1 Apache-2.0 1 0 0 Updated Jun 27, 2024
  • compbio-galaxy-wrappers Public

    OHSU Galaxy wrappers.

    ohsu-comp-bio/compbio-galaxy-wrappers’s past year of commit activity
    Python 6 11 0 0 Updated Jun 25, 2024
  • drs_downloader Public Forked from anvilproject/drs_downloader

    Download tool for AnVIL/TDR data identified by DRS URIs and Google

    ohsu-comp-bio/drs_downloader’s past year of commit activity
    Python 0 Apache-2.0 3 0 0 Updated Jun 5, 2024
  • vrs_anvil_toolkit Public

    Extract clinical variant interpretations from VCF using GA4GH VRS IDs

    ohsu-comp-bio/vrs_anvil_toolkit’s past year of commit activity
    Jupyter Notebook 0 MIT 0 17 (1 issue needs help) 3 Updated Jun 4, 2024
  • py-tes Public

    Python SDK for the GA4GH Task Execution API

    ohsu-comp-bio/py-tes’s past year of commit activity
    Python 4 MIT 8 17 3 Updated May 14, 2024
  • dos_connect Public

    Data Object Registry Connect

    ohsu-comp-bio/dos_connect’s past year of commit activity
    Python 8 1 17 1 Updated May 8, 2024
  • homebrew-formula Public

    homebrew tap for OHSU Comp Bio tools

    ohsu-comp-bio/homebrew-formula’s past year of commit activity
    Ruby 1 MIT 1 0 2 Updated Apr 27, 2024
View all repositories

Top languages

Loading…

Most used topics

Loading…