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    17 repositories

    • teaching

      Public
      Courses taught by Premal Shah @rutgers University
      HTML
      •
      MIT License
      •3•3•0•0•Updated May 7, 2024May 7, 2024

    • ProteinDecayNoise-paper

      Public
      This repo is related to the data that went into the paper associated with the thesis "Evaluating noise in protein decay"
      HTML
      •0•1•0•0•Updated Aug 23, 2023Aug 23, 2023

    • ltee_massspec

      Public
      Code for our paper studying metabolic effects of expression changes in the LTEE
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated May 18, 2023May 18, 2023

    • NADcapPro

      Public
      HTML
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Mar 30, 2023Mar 30, 2023

    • hypoxia-multiomics

      Public
      HTML
      •
      GNU General Public License v3.0
      •0•1•0•0•Updated Sep 30, 2022Sep 30, 2022

    • LTEE_gene_expression_2

      Public
      A repository for the second version of our LTEE gene expression paper
      HTML
      •
      MIT License
      •0•2•0•0•Updated Jul 28, 2022Jul 28, 2022

    • LTEE-gene-expression

      Public archive
      HTML
      •
      Apache License 2.0
      •0•1•0•0•Updated Jul 8, 2022Jul 8, 2022

    • nnPUlearning

      Public
      Non-negative Positive-Unlabeled (nnPU) and unbiased Positive-Unlabeled (uPU) learning reproductive code on MNIST and CIFAR10
      Python
      •
      Other
      •64•0•0•0•Updated Apr 21, 2022Apr 21, 2022

    • start-site-predictor

      Public
      Prediction of translation start sites using Machine Learning
      Jupyter Notebook
      •0•0•2•0•Updated Apr 18, 2022Apr 18, 2022

    • evome-app

      Public
      R
      •0•1•0•0•Updated Feb 18, 2022Feb 18, 2022

    • Intragenomic_variation_mutation_bias

      Public
      A repository presenting the results from our analysis on the effects of intragenomic mutation bias variation within budding yeasts.
      R
      •6•0•0•0•Updated Oct 28, 2021Oct 28, 2021

    • RiboRet

      Public
      An R package to keep our code for analyzing RiboRet data
      R
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•1•0•Updated Oct 4, 2021Oct 4, 2021

    • Dengue_RPLP1-P2

      Public
      HTML
      •0•0•0•0•Updated Nov 6, 2020Nov 6, 2020

    • XACT-seq

      Public
      Code for processing XACT-seq data
      Python
      •2•0•0•0•Updated Apr 10, 2020Apr 10, 2020

    • contingency_entrenchment

      Public
      Scripts for homology modeling and FoldX simulations
      Python
      •
      GNU General Public License v3.0
      •3•0•0•0•Updated Oct 19, 2017Oct 19, 2017

    • translation_note

      Public
      1•0•0•0•Updated Feb 12, 2016Feb 12, 2016

    • SMoPT

      Public
      Stochastic Model of Protein Translation
      C
      •3•0•0•0•Updated Jun 28, 2015Jun 28, 2015