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Pull requests: snakemake-workflows/dna-seq-gatk-variant-calling

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Pull requests list

removed duplicated subtitle
#1 by wdecoster was merged Jul 12, 2018 Loading…
1
Support for panel sequencing via restriction to sites.
#2 by johanneskoester was merged Dec 11, 2018 Loading…
Using peppy
#6 by vreuter was closed Apr 29, 2019 Loading…
28
Migrate to github actions.
#14 by johanneskoester was merged Oct 16, 2019 Loading…
obtain contigs in a lazy way, such that common.smk does not depend on…
#15 by johanneskoester was merged Oct 27, 2019 Loading…
Use the new workflow.inputfile handling
#16 by johanneskoester was closed May 28, 2020 Loading…
2
use peppy
#22 by stolarczyk was closed Apr 9, 2021 Loading…
7
update wrappers to latest release
#23 by johanneskoester was merged May 1, 2020 Loading…
use latest wrappers for reference download
#24 by johanneskoester was merged May 4, 2020 Loading…
Migrate annotation to VEP
#25 by johanneskoester was merged May 7, 2020 Loading…
Update README.md
#28 by EQt was merged Apr 20, 2021 Loading…
Mutect2
#38 by radio1988 was closed Apr 4, 2023 Loading…
update GitHub Actions workflow to use newer Actions versions
#41 by dlaehnemann was closed Jun 6, 2023 Loading…
1
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