Merge pull request PaddlePaddle#16198 from velconia/imperative_train_…

…speed

Improve imperative mode training speed

CMakeLists.txt

@@ -24,6 +24,8 @@ message(STATUS "CXX compiler: ${CMAKE_CXX_COMPILER}, version: "
         "${CMAKE_CXX_COMPILER_ID} ${CMAKE_CXX_COMPILER_VERSION}")
 message(STATUS "C compiler: ${CMAKE_C_COMPILER}, version: "
         "${CMAKE_C_COMPILER_ID} ${CMAKE_C_COMPILER_VERSION}")
+message(STATUS "AR tools: ${CMAKE_AR}")
+
 if(WIN32)
     set(CMAKE_SUPPRESS_REGENERATION ON)
     set(CMAKE_STATIC_LIBRARY_PREFIX lib)

paddle/fluid/framework/grad_op_desc_maker.h

@@ -14,7 +14,9 @@ limitations under the License. */
 
 #pragma once
 #include <algorithm>
+#include <memory>
 #include <string>
+#include <unordered_map>
 #include <unordered_set>
 #include <vector>
 #include "paddle/fluid/framework/op_desc.h"
@@ -55,11 +57,11 @@ class GradOpDescMakerBase {
                    std::back_inserter(ret_val),
                    [this](const std::string& fwd_var_name) -> std::string {
                      auto g_name = GradVarName(fwd_var_name);
-                     if (no_grad_set_.count(g_name)) {
-                       return kEmptyVarName;
-                     } else {
+                     if (no_grad_set_.empty() || !no_grad_set_.count(g_name)) {
                        (*this->grad_to_var_)[g_name] = fwd_var_name;
                        return g_name;
+                     } else {
+                       return kEmptyVarName;
                      }
                    });
     if (!drop_empty_grad) {

paddle/fluid/imperative/CMakeLists.txt

@@ -2,4 +2,5 @@ if(WITH_PYTHON)
 cc_library(layer SRCS layer.cc DEPS proto_desc operator device_context blas pybind)
 cc_library(tracer SRCS tracer.cc DEPS proto_desc device_context pybind)
 cc_library(engine SRCS engine.cc)
+cc_library(imperative_profiler SRCS profiler.cc)
 endif()

paddle/fluid/imperative/layer.cc

@@ -239,7 +239,7 @@ std::map<std::string, std::vector<VarBase*>> OpBase::ApplyGrad() {
       VLOG(3) << "apply grad op " << grad_op_desc->Type();
 
       // Allocate tmp grad output variable
-      for (auto it : grad_output_variable_map) {
+      for (const auto& it : grad_output_variable_map) {
         auto& outputs = tmp_grad_outputs[k][it.first];
         outputs.reserve(it.second.size());
         for (size_t i = 0; i < it.second.size(); ++i) {
@@ -273,9 +273,9 @@ std::map<std::string, std::vector<VarBase*>> OpBase::ApplyGrad() {
 
   // Add tmp grad outputs to original grad vars
   for (size_t k = 0; k < grad_output_vars_.size(); ++k) {
-    for (auto it : grad_output_vars_[k]) {
+    for (const auto& it : grad_output_vars_[k]) {
       auto& outputs = tmp_grad_outputs[k][it.first];
-      auto& origin_outputs = it.second;
+      const auto& origin_outputs = it.second;
       PADDLE_ENFORCE_EQ(outputs.size(), origin_outputs.size());
 
       for (size_t i = 0; i < outputs.size(); ++i) {

paddle/fluid/imperative/layer.h

@@ -294,17 +294,23 @@ class PYBIND11_HIDDEN OpBase {
 
   void InvokeBackwardHooks();
 
-  void TrackPreOp(const VarBase* inp_var, const std::string& inp_name) {
-    if (inp_var->PreOp() && !inp_var->IsStopGradient()) {
-      VLOG(3) << "add pre op " << inp_var->PreOp()->Type() << " in slot "
-              << inp_name;
-      pre_ops_[inp_name].push_back(inp_var->PreOp());
-      pre_ops_out_idx_[inp_name].push_back(inp_var->PreOpOutIdx());
-    } else {
-      VLOG(3) << "no pre op in slot " << inp_name
-              << " input var stop_gradient: " << inp_var->IsStopGradient();
-      pre_ops_[inp_name].push_back(nullptr);
-      // pre_ops_out_idx_[inp_name].push_back(-1);
+  void TrackPreOp(const std::string& inp_name,
+                  const std::vector<VarBase*>& inputs) {
+    auto& pre_ops_list = pre_ops_[inp_name];
+    pre_ops_list.reserve(inputs.size());
+    auto& pre_ops_out_idx_list = pre_ops_out_idx_[inp_name];
+    for (VarBase* inp_var : inputs) {
+      if (inp_var->PreOp() && !inp_var->IsStopGradient()) {
+        VLOG(3) << "add pre op " << inp_var->PreOp()->Type() << " in slot "
+                << inp_name;
+        pre_ops_list.emplace_back(inp_var->PreOp());
+        pre_ops_out_idx_list.push_back(inp_var->PreOpOutIdx());
+      } else {
+        VLOG(3) << "no pre op in slot " << inp_name
+                << " input var stop_gradient: " << inp_var->IsStopGradient();
+        pre_ops_list.emplace_back(nullptr);
+        // pre_ops_out_idx_list.push_back(-1);
+      }
     }
   }
 

paddle/fluid/imperative/profiler.cc

@@ -0,0 +1,62 @@
+// Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
+//
+// Licensed under the Apache License, Version 2.0 (the "License");
+// you may not use this file except in compliance with the License.
+// You may obtain a copy of the License at
+//
+//     http://www.apache.org/licenses/LICENSE-2.0
+//
+// Unless required by applicable law or agreed to in writing, software
+// distributed under the License is distributed on an "AS IS" BASIS,
+// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+// See the License for the specific language governing permissions and
+// limitations under the License.
+
+#include "paddle/fluid/imperative/profiler.h"
+
+#ifdef WITH_GPERFTOOLS
+#include "gperftools/profiler.h"
+#endif
+#include <gflags/gflags.h>
+#include <glog/logging.h>
+#include <mutex>   // NOLINT
+#include <thread>  // NOLINT
+
+DEFINE_string(
+    tracer_profile_fname, "xxgperf",
+    "Profiler filename for imperative tracer, which generated by gperftools."
+    "Only valid when compiled `WITH_PROFILER=ON`. Empty if disable.");
+
+namespace paddle {
+namespace imperative {
+
+static std::once_flag gTracerProfileOnce;
+#ifdef WITH_GPERFTOOLS
+static bool gTracerProfilerStarted = false;
+#endif
+
+void StartProfile() {
+  if (!FLAGS_tracer_profile_fname.empty()) {
+    std::call_once(gTracerProfileOnce, [] {
+#ifdef WITH_GPERFTOOLS
+      ProfilerStart(FLAGS_tracer_profile_fname.c_str());
+      gTracerProfilerStarted = true;
+#else
+      LOG(WARNING) << "Paddle is not compiled with gperftools. "
+                      "FLAGS_tracer_profile_fname will be ignored";
+#endif
+    });
+  }
+}
+
+void StopProfile() {
+#ifdef WITH_GPERFTOOLS
+  ProfilerFlush();
+#else
+  LOG(WARNING) << "Paddle is not compiled with gperftools. "
+                  "FLAGS_tracer_profile_fname will be ignored";
+#endif
+}
+
+}  // namespace imperative
+}  // namespace paddle

paddle/fluid/imperative/profiler.h

@@ -0,0 +1,25 @@
+// Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
+//
+// Licensed under the Apache License, Version 2.0 (the "License");
+// you may not use this file except in compliance with the License.
+// You may obtain a copy of the License at
+//
+//     http://www.apache.org/licenses/LICENSE-2.0
+//
+// Unless required by applicable law or agreed to in writing, software
+// distributed under the License is distributed on an "AS IS" BASIS,
+// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+// See the License for the specific language governing permissions and
+// limitations under the License.
+
+#pragma once
+
+namespace paddle {
+namespace imperative {
+
+extern void StartProfile();
+
+extern void StopProfile();
+
+}  // namespace imperative
+}  // namespace paddle

paddle/fluid/imperative/tracer.cc

@@ -23,23 +23,9 @@
 #include "paddle/fluid/platform/device_context.h"
 #include "paddle/fluid/platform/enforce.h"
 
-#ifdef WITH_GPERFTOOLS
-#include "gperftools/profiler.h"
-#endif
-
-DEFINE_string(
-    tracer_profile_fname, "",
-    "Profiler filename for imperative tracer, which generated by gperftools."
-    "Only valid when compiled `WITH_PROFILER=ON`. Empty if disable.");
-
 namespace paddle {
 namespace imperative {
 
-static std::once_flag gTracerProfileOnce;
-#ifdef WITH_GPERFTOOLS
-static bool gTracerProfilerStarted = false;
-#endif
-
 void CreateGradOp(const framework::OpDesc& op_desc,
                   const std::unordered_set<std::string>& no_grad_set,
                   const std::vector<framework::BlockDesc*>& grad_sub_block,
@@ -145,31 +131,13 @@ framework::VariableNameMap CreateOutputVarNameMap(
   return result;
 }
 
-Tracer::Tracer(framework::BlockDesc* root_block) : root_block_(root_block) {
-  if (!FLAGS_tracer_profile_fname.empty()) {
-    std::call_once(gTracerProfileOnce, [] {
-#ifdef WITH_GPERFTOOLS
-      ProfilerStart(FLAGS_tracer_profile_fname.c_str());
-      gTracerProfilerStarted = true;
-#else
-      LOG(WARNING) << "Paddle is not compiled with gperftools. "
-                      "FLAGS_tracer_profile_fname will be ignored";
-#endif
-    });
-  }
-}
+Tracer::Tracer(framework::BlockDesc* root_block) : root_block_(root_block) {}
 
 std::set<std::string> Tracer::Trace(OpBase* op, const VarBasePtrMap& inputs,
                                     const VarBasePtrMap& outputs,
                                     framework::AttributeMap attrs_map,
                                     const platform::Place expected_place,
                                     const bool stop_gradient) {
-#ifdef WITH_GPERFTOOLS
-  if (gTracerProfilerStarted) {
-    ProfilerFlush();
-  }
-#endif
-
   framework::VariableValueMap invars_map;
   framework::VariableValueMap outvars_map;
 
@@ -184,14 +152,14 @@ std::set<std::string> Tracer::Trace(OpBase* op, const VarBasePtrMap& inputs,
                               inp->Name());
 
       invars.emplace_back(inp->var_);
-      op->TrackPreOp(inp, it.first);
       if (!stop_gradient) {
         current_vars_map[inp->Name()] = inp;
       }
       VLOG(3) << "input var name: " << inp->Name()
               << " inited: " << inp->var_->IsInitialized()
               << " stop_grad: " << inp->IsStopGradient();
     }
+    op->TrackPreOp(it.first, it.second);
   }
 
   op->output_vars_ = outputs;
@@ -319,9 +287,7 @@ std::vector<VarBase*> Tracer::PyTrace(OpBase* op,
   std::vector<framework::Variable*> ret_vars =
       PyLayer::Apply(op->forward_id_, inputs);
 
-  for (VarBase* inp : inputs) {
-    op->TrackPreOp(inp, PyLayer::kFwdInp);
-  }
+  op->TrackPreOp(PyLayer::kFwdInp, inputs);
 
   std::vector<VarBase*>& outputs = op->output_vars_[PyLayer::kFwdOut];
   outputs.reserve(ret_vars.size());

paddle/fluid/inference/CMakeLists.txt

@@ -91,5 +91,5 @@ if(WITH_TESTING)
   add_subdirectory(tests/book)
   if(WITH_INFERENCE_API_TEST)
     add_subdirectory(tests/api)
-  endif()  
+  endif()
 endif()

paddle/fluid/pybind/CMakeLists.txt

@@ -1,6 +1,6 @@
 set(PYBIND_DEPS pybind python proto_desc memory executor async_executor prune
   feed_fetch_method pass_builder parallel_executor profiler layer scope_pool
-  tracer analysis_predictor)
+  tracer analysis_predictor imperative_profiler)
 
 if(WITH_PYTHON)
   list(APPEND PYBIND_DEPS py_func_op)

paddle/fluid/pybind/imperative.cc

@@ -42,6 +42,7 @@ void BindTracer(pybind11::module* m) {
               framework::AttributeMap attrs_map,
               const platform::CPUPlace expected_place,
               const bool stop_gradient = false) {
+             pybind11::gil_scoped_release release;
              return self.Trace(op, inputs, outputs, attrs_map, expected_place,
                                stop_gradient);
            })
@@ -52,6 +53,7 @@ void BindTracer(pybind11::module* m) {
               framework::AttributeMap attrs_map,
               const platform::CUDAPlace expected_place,
               const bool stop_gradient = false) {
+             pybind11::gil_scoped_release release;
              return self.Trace(op, inputs, outputs, attrs_map, expected_place,
                                stop_gradient);
            })

paddle/fluid/pybind/pybind.cc

@@ -36,6 +36,7 @@ limitations under the License. */
 #include "paddle/fluid/framework/selected_rows.h"
 #include "paddle/fluid/framework/version.h"
 #include "paddle/fluid/imperative/layer.h"
+#include "paddle/fluid/imperative/profiler.h"
 #include "paddle/fluid/memory/allocation/allocator_strategy.h"
 #include "paddle/fluid/memory/allocation/legacy_allocator.h"
 #include "paddle/fluid/operators/activation_op.h"
@@ -156,6 +157,11 @@ PYBIND11_MODULE(core, m) {
   m.def("print_mem_usage",
         []() { return memory::allocation::GPUMemMonitor.PrintMemUsage(); });
 
+  m.def("start_imperative_gperf_profiler",
+        []() { imperative::StartProfile(); });
+
+  m.def("stop_imperative_gperf_profiler", []() { imperative::StopProfile(); });
+
   py::class_<imperative::VarBase>(m, "VarBase", R"DOC()DOC")
       .def(
           py::init<const std::string &, paddle::framework::proto::VarType::Type,

python/paddle/fluid/__init__.py

@@ -132,7 +132,8 @@ def __bootstrap__():
         'allocator_strategy', 'reader_queue_speed_test_mode',
         'print_sub_graph_dir', 'pe_profile_fname', 'warpctc_dir',
         'inner_op_parallelism', 'enable_parallel_graph',
-        'multiple_of_cupti_buffer_size', 'enable_subgraph_optimize'
+        'multiple_of_cupti_buffer_size', 'enable_subgraph_optimize',
+        'tracer_profile_fname'
     ]
     if 'Darwin' not in sysstr:
         read_env_flags.append('use_pinned_memory')

python/paddle/fluid/imperative/__init__.py

@@ -26,8 +26,12 @@
 from . import tracer
 from .tracer import *
 
+from . import profiler
+from .profiler import *
+
 __all__ = []
 __all__ += layers.__all__
 __all__ += base.__all__
 __all__ += nn.__all__
 __all__ += tracer.__all__
+__all__ += profiler.__all__

python/paddle/fluid/imperative/profiler.py

@@ -0,0 +1,30 @@
+#   Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#     http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+
+from __future__ import print_function
+
+from .. import core
+
+__all__ = [
+    'start_gperf_profiler',
+    'stop_gperf_profiler',
+]
+
+
+def start_gperf_profiler():
+    core.start_imperative_gperf_profiler()
+
+
+def stop_gperf_profiler():
+    core.stop_imperative_gperf_profiler()

tools/manylinux1/build_scripts/build.sh

@@ -153,3 +153,9 @@ done
 
 # Restore LD_LIBRARY_PATH
 LD_LIBRARY_PATH="${ORIGINAL_LD_LIBRARY_PATH}"
+
+# According to ar issues: https://lists.gnu.org/archive/html/bug-binutils/2016-05/msg00211.html
+# we should install new version ar with 64-bit supported here
+wget https://ftp.gnu.org/gnu/binutils/binutils-2.27.tar.gz
+tar xzf binutils-2.27.tar.gz && cd binutils-2.27
+./configure --prefix=/opt/rh/devtoolset-2/root/usr/ --enable-64-bit-archive && make -j `nproc` && make install