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  1. AnnoGenie AnnoGenie Public

    A bioinformatics pipeline for the de-novo annotation of genomes using NGS data from closely related species.

    Shell 1

  2. AsthmaClustering AsthmaClustering Public

    Final project for 02-680 (Machine Learning for Scientists) at CMU. Implementation of algorithms to cluster genes based on asthma severity and implementation of an asthma severity classifier.

    Jupyter Notebook 1

  3. AndrewLutsky/KinomeScripts AndrewLutsky/KinomeScripts Public

    Scripts for Andrew Lutsky

    Jupyter Notebook 3

  4. PromoterStrength PromoterStrength Public

    Model to predict promoter strength using embeddings generated from a DNA large language model.

    Jupyter Notebook

  5. ProDy ProDy Public

    Forked from prody/ProDy

    A Python Package for Protein Dynamics Analysis

    Python