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update filename for meta_config
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wdingx committed Nov 4, 2017
1 parent a2f8853 commit 73d80d5
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions scripts/sf_association.py
Original file line number Diff line number Diff line change
Expand Up @@ -205,7 +205,7 @@ def infer_branch_associations(path, total_strains_count, strain_fraction_branch_
from sf_geneCluster_align_makeTree import load_sorted_clusters
from sf_coreTree_json import metadata_load
metaFile= '%s%s'%(path,'metainfo.tsv')
data_description = '%s%s'%(path,'meta_tidy.tsv')
data_description = '%s%s'%(path,'meta_config.tsv')
association_dict = defaultdict(dict)
metadata = Metadata(metaFile, data_description)
metadata_dict = metadata.to_dict()
Expand Down Expand Up @@ -241,7 +241,7 @@ def infer_presence_absence_associations(path, total_strains_count,
from sf_geneCluster_align_makeTree import load_sorted_clusters
from sf_coreTree_json import metadata_load
metaFile= '%s%s'%(path,'metainfo.tsv')
data_description = '%s%s'%(path,'meta_tidy.tsv')
data_description = '%s%s'%(path,'meta_config.tsv')
association_dict = defaultdict(dict)
metadata = Metadata(metaFile, data_description)
metadata_dict = metadata.to_dict()
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