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OHC tutorial

OHC tutorial #520

Triggered via pull request June 29, 2024 14:51
@aabeleanaabelean
synchronize #318
tutorialOHC
Status Failure
Total duration 10m 12s
Artifacts

check-standard.yaml

on: pull_request
Matrix: R-CMD-check
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21 errors and 8 warnings
macos-latest (release)
--- re-building ‘calving_tutorial.Rmd’ using rmarkdown
macos-latest (release)
processing vignette 'calving_tutorial.Rmd' failed with diagnostics:
macos-latest (release)
processing vignette 'covid_mcmc.Rmd' failed with diagnostics:
macos-latest (release)
processing vignette 'covid_ST_mcmc.Rmd' failed with diagnostics:
macos-latest (release)
processing vignette 'covid.Rmd' failed with diagnostics:
macos-latest (release)
processing vignette 'data_preprocessing.Rmd' failed with diagnostics:
macos-latest (release)
processing vignette 'ohc_tutorial.Rmd' failed with diagnostics:
macos-latest (release)
processing vignette 'priors.Rmd' failed with diagnostics:
macos-latest (release)
Vignette re-building failed.
macos-latest (release)
Build process failed
macos-latest (release)
No such keg: /opt/homebrew/Cellar/r
ubuntu-latest (release)
--- re-building ‘calving_tutorial.Rmd’ using rmarkdown
ubuntu-latest (release)
processing vignette 'calving_tutorial.Rmd' failed with diagnostics:
ubuntu-latest (release)
processing vignette 'covid.Rmd' failed with diagnostics:
ubuntu-latest (release)
processing vignette 'covid_ST_mcmc.Rmd' failed with diagnostics:
ubuntu-latest (release)
processing vignette 'covid_mcmc.Rmd' failed with diagnostics:
ubuntu-latest (release)
processing vignette 'data_preprocessing.Rmd' failed with diagnostics:
ubuntu-latest (release)
processing vignette 'ohc_tutorial.Rmd' failed with diagnostics:
ubuntu-latest (release)
processing vignette 'priors.Rmd' failed with diagnostics:
ubuntu-latest (release)
Vignette re-building failed.
ubuntu-latest (release)
Build process failed
macos-latest (release)
The vignette title specified in \VignetteIndexEntry{} is different from the title in the YAML metadata. The former is "Simple Linear Regression with fdmr", and the latter is "Glacier Calving in Svalbard with fdmr". If that is intentional, you may set options(rmarkdown.html_vignette.check_title = FALSE) to suppress this check.
macos-latest (release)
No files were found with the provided path: /Users/runner/work/fdmr/fdmr/check. No artifacts will be uploaded.
macos-latest (release)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
macos-latest (release)
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
macos-latest (release)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
ubuntu-latest (release)
The vignette title specified in \VignetteIndexEntry{} is different from the title in the YAML metadata. The former is "Simple Linear Regression with fdmr", and the latter is "Glacier Calving in Svalbard with fdmr". If that is intentional, you may set options(rmarkdown.html_vignette.check_title = FALSE) to suppress this check.
ubuntu-latest (release)
No files were found with the provided path: /home/runner/work/fdmr/fdmr/check. No artifacts will be uploaded.
ubuntu-latest (release)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.