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16 Open 53 Closed
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Issues list

Retry with timeout when polling Cromwell server bug Something isn't working
#155 by lmtani was closed Jan 6, 2021
1
2 👀 1
Change to gitflow development model
#23 by jdidion was closed Aug 29, 2019 1.0
1
raise exception if wdl file does not exist enhancement New feature or request
#5 by michaeltneylon was closed May 3, 2019
1
pluggable types: BAM enhancement New feature or request
#6 by michaeltneylon was closed May 3, 2019
3
Decide whether to support python2
#8 by jdidion was closed Aug 7, 2019
1
Don't attempt to create imports zip if there are no imports bug Something isn't working
#9 by michaeltneylon was closed May 3, 2019
1
Make default imports file path relative to fspath enhancement New feature or request good first issue Good for newcomers
#11 by michaeltneylon was closed Aug 7, 2019
2
Make default test data file path relative to fspath enhancement New feature or request good first issue Good for newcomers
#12 by michaeltneylon was closed Aug 7, 2019
2
separation assertion in run_workflow as a separate method enhancement New feature or request
#13 by xquek was closed Oct 10, 2019 1.2
2
BamDataFile: remove randomness commonly added by samtools
#14 by michaeltneylon was closed May 13, 2019
1
Scrub Lilly internal details from docs
#19 by jdidion was closed Aug 22, 2019 1.0
1
Add bling
#20 by jdidion was closed Aug 23, 2019 1.0
2
Configure Travis CI
#21 by jdidion was closed Aug 23, 2019 1.0
import_paths ScopeMismatch
#2 by michaeltneylon was closed Mar 11, 2019
1
Add boilerplate
#24 by jdidion was closed Aug 29, 2019 1.0
Improve test coverage
#25 by jdidion was closed Aug 16, 2019 1.0
@jdidion
1
Rename fixtures that start with test_
#26 by jdidion was closed Aug 9, 2019 1.0
@jdidion
Put headers config in test_data.json file
#29 by jdidion was closed Aug 22, 2019 1.0
1
Assume standard proxy environment variables
#30 by jdidion was closed Aug 22, 2019
1
Better exception for workflow failure enhancement New feature or request
#34 by jdidion was closed Oct 10, 2019 1.2
@jdidion
Add miniwdl exectuor enhancement New feature or request
#38 by jdidion was closed Oct 1, 2019 1.1
@jdidion
1
Add dxWDL executor enhancement New feature or request
#39 by jdidion was closed Feb 11, 2020 1.3
@jdidion
1
Handle duplicate plugins - give priority to 3rd party
#40 by jdidion was closed Aug 27, 2019
1
Data localization fails depending on where tests are executed
#46 by michaeltneylon was closed Aug 28, 2019
Configure automated doc generation (such as RTD)
#22 by jdidion was closed Aug 10, 2019 1.0
1
ProTip! What’s not been updated in a month: updated:<2024-08-22.