Use camel-case args for countsFromAbundance option

davebx · Aug 20, 2021 · 816be7b · 816be7b
1 parent a58c8d3
commit 816be7b
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/tools/tximport/tximport.xml b/tools/tximport/tximport.xml
@@ -123,9 +123,9 @@ Rscript '${__tool_directory__}/tximport.R'
         </conditional>
         <param name="counts_from_abundance" type="select" label="Summarization using the abundance (TPM) values?">
             <option value="no">No</option>
-            <option value="scaled_TPM">Scaled up to library size</option>
-            <option value="length_scaled_TPM">Scaled using the avg. transcript legth over samples and then the library size</option>
-            <option value="dtu_scaled_TPM">Scaled using the median transcript length among isoforms of a gene, and then the library size</option>
+            <option value="scaledTPM">Scaled up to library size</option>
+            <option value="lengthScaledTPM">Scaled using the avg. transcript legth over samples and then the library size</option>
+            <option value="dtuScaledTPM">Scaled using the median transcript length among isoforms of a gene, and then the library size</option>
         </param>
     </inputs>
     <outputs>