decreased disk size

decreased disk size based on guideline below, assuming 10 gvcfs small_disk = (num_gvcfs / 10) + 10 medium_disk = (num_gvcfs * 15) + 10 huge_disk = num_gvcfs + 10
gatk-workflows · Dec 8, 2017 · f57903d · f57903d
1 parent c1c2253
commit f57903d
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/joint-discovery-gatk4.hg38.wgs.inputs.json b/joint-discovery-gatk4.hg38.wgs.inputs.json
@@ -74,10 +74,10 @@
   "JointGenotyping.SNPGatherTranches.mem_size": "7 GB",
 
   "##_COMMENT8": "DISK SIZE ALLOCATION",
-  "JointGenotyping.small_disk": 100,
-  "JointGenotyping.medium_disk": 200,
-  "JointGenotyping.huge_disk": 2000,
-  
+  "JointGenotyping.small_disk": 11,
+  "JointGenotyping.medium_disk": 160,
+  "JointGenotyping.huge_disk": 20,
+
   "##_COMMENT9": "PREEMPTIBLES",
   "JointGenotyping.FinalGatherVcf.preemptibles": 5,
   "JointGenotyping.IndelsVariantRecalibrator.preemptibles": 5,