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GATK 4.1.4.0 Dev #27

Merged
merged 42 commits into from
Oct 15, 2019
Merged

GATK 4.1.4.0 Dev #27

merged 42 commits into from
Oct 15, 2019

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bshifaw
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@bshifaw bshifaw commented Sep 30, 2019

Update WDL to GATK 4.1.4.0 release.

  • WDL now written in WDL 1.0 -- enabling call-caching on Terra
  • Oncotator is no longer an option -- the workflow only supports Functotator now

bshifaw added 30 commits November 7, 2018 17:07
…ular mutect2 wdl with wdl version 1, updated mutect_pon wdl with wdl version 1
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@@ -0,0 +1,28 @@
{
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@bshifaw I reviewed these inputs as you requested and they are fine.

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@bshifaw bshifaw merged commit 92e942d into master Oct 15, 2019
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