Commits

History for

Commits on Nov 22, 2022

Correct reverse and complement functions to only allow reverse complement
milnus
committedNov 22, 2022

Commits on Nov 9, 2022

Add in correction for gff coordinates
milnus
committedNov 9, 2022

Commits on Nov 8, 2022

Add stand and name column to tests
milnus
committedNov 8, 2022
Add additional unit tests and make rest work with new arguments
milnus
committedNov 8, 2022
Add in functions to fix the start site to be a seed. No functional tests
milnus
committedNov 8, 2022

Commits on Nov 6, 2022

Add in tblastn function mainly implemented by Andrew
milnus
committedNov 6, 2022

Commits on Jun 29, 2022

Add in git changed hashed
milnus
committedJun 29, 2022

Commits on Dec 9, 2021

Merge branch 'dev'
milnus
committedDec 9, 2021

Commits on Dec 8, 2021

Add in a better README in addition to the wiki. Add in a nice exit when samtools faidx fails. Remove an unused exit error. Change dependency versions allowed
milnus
committedDec 8, 2021

Commits on Dec 1, 2021

minimal unit test for BlastOutSortedBed added 2 seed pairs and exclusion required
BiologicalScientist
committedDec 1, 2021
files for Blast Out sorted bed test
BiologicalScientist
committedDec 1, 2021

Commits on Nov 29, 2021

created mock blastdb and ran mock blast to generate xml file
BiologicalScientist
committedNov 29, 2021
added seeds fasta file
BiologicalScientist
committedNov 29, 2021
added mock_fasta and gff3 files
BiologicalScientist
committedNov 29, 2021

Commits on Nov 4, 2021

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