satijalab / seurat
R toolkit for single cell genomics
See what the GitHub community is most excited about this month.
R toolkit for single cell genomics
R for data science: a book
tools for the analysis of color data in R
Equipment Loss Tracking
Friends don't let friends make certain types of data visualization - What are they and why are they bad.
R package for performing 2-sample MR using MR-Base database
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell and spatially resolved transcriptomics
Produce PRISMA-2020 compliant flow diagrams
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
Simple Features for R
Inferring CNV from Single-Cell RNA-Seq
R toolkit for the analysis of single-cell chromatin data
A Wes Anderson color palette for R
🎓 A collection of interactive courses for the swirl R package.
ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
📊 A universal enrichment tool for interpreting omics data
Accurate sample inference from amplicon data with single nucleotide resolution
Make Complex Heatmaps
Community-provided extensions to Seurat
R package for causal machine learning for segment discovery and analysis
R package for detecting doublets in single-cell RNA sequencing data
renv: Project environments for R.