Commits

Branch selector

 fe1f063

User selector

All users

Datepicker

All time

Commit History

Commits on Dec 8, 2017

• Update Readme

  wdingx

  authoredDec 8, 2017
  fe1f063

• Update Readme

  wdingx

  authoredDec 8, 2017
  2e9aa15

• Merge pull request #3 from bebatut/diamond

  wdingx

  authoredDec 8, 2017
  89d2143

• Use diamond installed with conda

  bebatut

  committedDec 8, 2017
  e422c75

Commits on Nov 5, 2017

• add association_columns for metaConfiguration.js

  wdingx

  committedNov 5, 2017
  c3b69ae

Commits on Nov 4, 2017

• update gzip

  wdingx

  committedNov 4, 2017
  c9707d8

• update file path for association calculation

  wdingx

  committedNov 4, 2017
  7575589

• update filename for meta_config

  wdingx

  committedNov 4, 2017
  73d80d5

Commits on Oct 26, 2017

• mv strain_tree.nwk

  wdingx

  committedOct 26, 2017
  a2f8853

Commits on Oct 5, 2017

• record command lines for rRNAs

  wdingx

  committedOct 5, 2017
  9b0e0e2

Commits on Oct 3, 2017

• update parameter

  wdingx

  committedOct 3, 2017
  cbd57fb

Commits on Sep 17, 2017

• space instead of underscore

  wdingx

  committedSep 17, 2017
  594ab06

• use species name instead of strain list for temp_folder'sprefix

  wdingx

  committedSep 17, 2017
  56aec8c

• use species_name instead of strain_list

  wdingx

  committedSep 17, 2017
  3c158c9

• add a central tmp folder to hold all temp folders; add CDS to infer aa_muts or not (not for RNA)

  wdingx

  committedSep 17, 2017
  4a38206

• add --metainfo_fpath

  wdingx

  committedSep 17, 2017
  4b11890

• update parameter

  wdingx

  committedSep 17, 2017
  ef74f43

• meta_tidy_fpath -> meta_data_config

  wdingx

  committedSep 17, 2017
  63ffa3a

• make a random string when locus_tag absent

  wdingx

  committedSep 17, 2017
  5636c77

Commits on Aug 31, 2017

• update mafft log

  wdingx

  committedAug 31, 2017
  ff05b60

Commits on Aug 30, 2017

• update rna

  wdingx

  committedAug 30, 2017
  1474062

• update file transfer

  wdingx

  committedAug 30, 2017
  864cdd7

• update TestSet

  wdingx

  committedAug 30, 2017
  0ecba7d

Commits on Aug 26, 2017

• updates on thresholds for BAmin and PAmax

  wdingx

  committedAug 26, 2017
  afd746e

Commits on Aug 23, 2017

• updates on strain_fraction for associations

  wdingx

  committedAug 23, 2017
  f95baf1

• add strain_fraction_branch_association

  wdingx

  committedAug 23, 2017
  d45ded6

• add param min_strain_fraction_branch_association

  wdingx

  committedAug 23, 2017
  4e456a8

• small edits on moving files

  wdingx

  committedAug 23, 2017
  344eadd

• add params for min_strain_fraction_association, max_strain_fraction_association for Presence association

  wdingx

  committedAug 23, 2017
  dcc57ba

• divide-and-conquer: last run threshold 0

  wdingx

  committedAug 23, 2017
  7697c75

• organismName default

  wdingx

  committedAug 23, 2017
  815db61

Commits on Jul 19, 2017

• update readme

  wdingx

  committedJul 19, 2017
  0a4dfce

• update options

  wdingx

  committedJul 19, 2017
  80fe0ef

• update readme

  wdingx

  committedJul 19, 2017
  3df743f

Commits on Jul 16, 2017

• update readme

  wdingx

  committedJul 16, 2017
  e36739f

Pagination

PreviousNext