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Issues list

Add links to papers in CITING section
#35 by tseemann was closed Apr 26, 2016 updated Apr 26, 2016
1
Breakpoint ref filter enhancement
#41 by noporpoise was closed Sep 28, 2016 updated Sep 28, 2016
1
vcfcov and --nkmers
#45 by peterdfields was closed Oct 31, 2016 updated Oct 31, 2016
1
Use of -G option of contigs command.
#46 by yeban was closed Dec 13, 2016 updated Dec 13, 2016
1
Behaviour of popbubbles command.
#49 by yeban was closed Jan 12, 2017 updated Jan 12, 2017
1
Help output shows version 0.0.3.
#50 by yeban was closed Feb 5, 2017 updated Feb 5, 2017
1
reads command produces an additional bogus file.
#51 by yeban was closed Feb 5, 2017 updated Feb 5, 2017
1
Cleaning failing with Assert Failed db_graph_alloc(): num_of_cols > 0
#47 by Phelimb was closed Feb 5, 2017 updated Feb 5, 2017
5
mccortex clean's help output
#48 by yeban was closed Feb 5, 2017 updated Feb 5, 2017
1
Overlapping paired-end reads
#33 by tseemann was closed Apr 17, 2016 updated Feb 11, 2017
3
What does mccortex build do if it encounters Ns in the read?
#52 by yeban was closed Mar 14, 2017 updated Mar 14, 2017
2
bcftools doesn't compile with gcc 4.9 on MacOSX
#31 by rec3141 was closed Mar 16, 2017 updated Mar 16, 2017
3
make-pipeline.pl error
#56 by yeban was closed May 5, 2017 updated May 5, 2017
1
zero coverage genotyping
#57 by hcdenbakker was closed May 27, 2017 updated May 27, 2017
2
Cygwin make fails due to missing _O_BINARY error in xxHash
#61 by ffranr was closed Aug 9, 2017 updated Aug 9, 2017
1
Fix README
#54 by iqbal-lab was closed Aug 9, 2017 updated Aug 9, 2017
Pjoin memory allocation error
#62 by carlyprior was closed Aug 28, 2017 updated Aug 28, 2017
3
No reference option for bubbles/calls2vcf
#63 by carlyprior was closed Sep 9, 2017 updated Sep 9, 2017
3
long reads
#60 by jdmontenegro was closed Sep 9, 2017 updated Sep 9, 2017
1
No output in vcfs directory.
#59 by IdaBonde was closed Sep 10, 2017 updated Sep 10, 2017
1
Add FAQ
#44 by yannickwurm was closed Sep 10, 2017 updated Sep 10, 2017
3
Links files are really big
#64 by winni2k was closed Sep 10, 2017 updated Sep 10, 2017
2
interpretation of graph build log
#58 by roddypr was closed Sep 10, 2017 updated Sep 12, 2017
5
Creating cortex graph from more than two FASTQ files
#65 by winni2k was closed Jan 9, 2018 updated Jan 10, 2018
3
Error message during installation
#53 by abeu9727 was closed Mar 16, 2017 updated Mar 12, 2018
2
ProTip! Updated in the last three days: updated:>2024-07-07.