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Pull requests: biocommons/biocommons.seqrepo

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Pull requests list

chore: add git ignore revs file
#165 by jsstevenson was merged Jun 24, 2024 Loading…
refactor: use Python 3 stdlib instead of six
#164 by jsstevenson was merged Jun 13, 2024 Loading…
1
build!: move ipython/repl functionality to optional dependency group
#163 by jsstevenson was merged Jul 5, 2024 Loading…
1
1
fix: properly initialize file handler
#160 by jsstevenson was merged Jun 13, 2024 Loading…
1
style: format with Ruff
#158 by jsstevenson was merged Jun 21, 2024 Loading…
1
docs: add note about commit()
#157 by jsstevenson was merged Jun 5, 2024 Loading…
1
chore: fix license classifier
#154 by jsstevenson was merged Jun 5, 2024 Loading…
fix: remove unneeded __future__ imports
#153 by jsstevenson was merged Jun 5, 2024 Loading…
docs: add description of store()
#152 by jsstevenson was merged May 31, 2024 Loading…
1
fix: resolve type errors/add type annotations
#151 by jsstevenson was merged May 30, 2024 Loading…
14
refactor: use importlib instead of pkg_resources
#149 by jsstevenson was merged Jun 3, 2024 Loading…
2
Do not preserve permissions when pulling an instance with rsync
#144 by theferrit32 was merged Apr 21, 2024 Loading…
1
@theferrit32
1
style: apply updated style configs from template
#141 by jsstevenson was merged Mar 28, 2024 Loading…
fix: finish migrating from setup.cfg to pyproject.toml in order to install seqrepo cli
#139 by reece was merged Feb 20, 2024 Loading…
1
3
build: fix dynamic dependencies for newer setuptools versions
#133 by jsstevenson was merged Jan 19, 2024 Loading…
3
feat(130): Introduces SEQREPO_FD_CACHE_MAXSIZE env var
#131 by kazmiekr was merged Jan 23, 2024 Loading…
1
4
Citation file
#123 by afrubin was merged Sep 18, 2023 Loading…
Update README to support OSX users
#122 by dylan-myome was merged Sep 18, 2023 Loading…
#119: migrate to biocommons.example template
#120 by reece was merged Sep 17, 2023 Loading…
112 make fastadir thread safe
#118 by reece was merged Nov 13, 2023 Loading…
2
Thread safety for FastaDir file handle cache
#117 by theferrit32 was merged Nov 13, 2023 Loading…
3
docs: proposing to use default issue templates (#110)
#111 by holtgrewe was merged Sep 9, 2023 Loading…
style: apply style black, flake8, isort (#108)
#109 by holtgrewe was closed Mar 28, 2024 Loading… 0.7
4
ci: update GitHub actions CI and add release-please (#104)
#107 by holtgrewe was closed Mar 28, 2024 Loading… 0.7
3
Update README.md
#102 by holtgrewe was merged Apr 19, 2023 Loading…
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